Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.64□□□□□ -0.23
SprnQ8BWU1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SprnQ8BWU1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gm9103-201ENSMUST00000119371 405 ntBASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gm10052-201ENSMUST00000168019 960 ntBASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gm29518-201ENSMUST00000190858 372 ntBASIC13.63□□□□□ -0.23
SprnQ8BWU1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.63□□□□□ -0.23
SprnQ8BWU1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Gm7729-201ENSMUST00000050143 801 ntBASIC13.63□□□□□ -0.23
SprnQ8BWU1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.63□□□□□ -0.23
SprnQ8BWU1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SprnQ8BWU1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.62□□□□□ -0.23
SprnQ8BWU1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.62□□□□□ -0.23
SprnQ8BWU1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Gm27704-201ENSMUST00000185094 107 ntBASIC13.62□□□□□ -0.23
SprnQ8BWU1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SprnQ8BWU1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm11355-201ENSMUST00000121120 306 ntBASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm9013-201ENSMUST00000132939 882 ntBASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm17808-201ENSMUST00000200859 894 ntBASIC13.61□□□□□ -0.23
SprnQ8BWU1 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SprnQ8BWU1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms