Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Gm8097-201ENSMUST00000117903 829 ntBASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip4Q8BQP8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rab11fip4Q8BQP8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Gm8655-201ENSMUST00000221159 852 ntBASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip4Q8BQP8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Gm37935-201ENSMUST00000192012 982 ntBASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Gm5364-201ENSMUST00000216789 889 ntBASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip4Q8BQP8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip4Q8BQP8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip4Q8BQP8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rab11fip4Q8BQP8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rab11fip4Q8BQP8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms