Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm44450-201ENSMUST00000199528 114 ntBASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 BC037039-201ENSMUST00000192003 2205 ntBASIC12.73□□□□□ -0.37
Smco3Q8BQM7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smco3Q8BQM7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco3Q8BQM7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco3Q8BQM7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms