Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.17□□□□□ -0.14
Rhbdd3Q8BP97 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Gm7367-201ENSMUST00000057611 492 ntBASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rhbdd3Q8BP97 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gm27742-201ENSMUST00000184667 60 ntBASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhbdd3Q8BP97 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Mir3081-201ENSMUST00000175305 84 ntBASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhbdd3Q8BP97 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms