Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sfr1Q8BP27 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Gm7222-201ENSMUST00000117512 906 ntBASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.69■□□□□ 0.1
Sfr1Q8BP27 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sfr1Q8BP27 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Gm27646-201ENSMUST00000183989 110 ntBASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sfr1Q8BP27 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Gm15173-201ENSMUST00000122049 433 ntBASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Rubie-203ENSMUST00000227803 2430 ntBASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sfr1Q8BP27 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sfr1Q8BP27 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.66■□□□□ 0.1
Sfr1Q8BP27 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms