Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp2bQ8BJF9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp2bQ8BJF9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp2bQ8BJF9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2bQ8BJF9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2bQ8BJF9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms