Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Gm18206-201ENSMUST00000207027 926 ntBASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.87□□□□□ -0.03
Trim23Q8BGX0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim23Q8BGX0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm14140-201ENSMUST00000119999 995 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm27525-201ENSMUST00000184465 107 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim23Q8BGX0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim23Q8BGX0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms