Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim6Q8BGE7 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim6Q8BGE7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Mir6404-201ENSMUST00000183699 94 ntBASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim6Q8BGE7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim6Q8BGE7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim6Q8BGE7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim6Q8BGE7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms