Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.05□□□□□ -0.32
Upk3bQ80YF6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk3bQ80YF6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.03□□□□□ -0.32
Upk3bQ80YF6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk3bQ80YF6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Upk3bQ80YF6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms