Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Srrm3Q80WV7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Srrm3Q80WV7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Gm27525-201ENSMUST00000184465 107 ntBASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Srrm3Q80WV7 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Sybu-209ENSMUST00000228639 4113 ntBASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Gm18206-201ENSMUST00000207027 926 ntBASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Srrm3Q80WV7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Mir1668-201ENSMUST00000184114 107 ntBASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Gm27742-201ENSMUST00000184667 60 ntBASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Srrm3Q80WV7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Srrm3Q80WV7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Srrm3Q80WV7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Srrm3Q80WV7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms