Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
ShprhQ7TPQ3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ShprhQ7TPQ3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ShprhQ7TPQ3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ShprhQ7TPQ3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ShprhQ7TPQ3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.57■■□□□ 1.04
ShprhQ7TPQ3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Asic1-205ENSMUST00000228185 1818 ntBASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Gm29667-201ENSMUST00000190817 490 ntBASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ShprhQ7TPQ3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ShprhQ7TPQ3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Gm6756-201ENSMUST00000180647 1620 ntBASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Gm6912-201ENSMUST00000117218 544 ntBASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Gm4875-201ENSMUST00000118257 786 ntBASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Gm12490-201ENSMUST00000120255 560 ntBASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Shd-206ENSMUST00000225145 998 ntBASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ShprhQ7TPQ3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Gm27838-201ENSMUST00000184829 128 ntBASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ShprhQ7TPQ3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms