Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.58□□□□□ -0.4
Vma21Q78T54 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vma21Q78T54 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 BC037039-201ENSMUST00000192003 2205 ntBASIC12.57□□□□□ -0.4
Vma21Q78T54 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.57□□□□□ -0.4
Vma21Q78T54 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gm10252-201ENSMUST00000209541 832 ntBASIC12.57□□□□□ -0.4
Vma21Q78T54 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vma21Q78T54 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.57□□□□□ -0.4
Vma21Q78T54 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vma21Q78T54 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vma21Q78T54 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.56□□□□□ -0.4
Vma21Q78T54 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm25406-201ENSMUST00000157599 105 ntBASIC12.55□□□□□ -0.4
Vma21Q78T54 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vma21Q78T54 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.55□□□□□ -0.4
Vma21Q78T54 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.55□□□□□ -0.4
Vma21Q78T54 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vma21Q78T54 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Vma21Q78T54 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms