Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm21867-201ENSMUST00000189917 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm29269-201ENSMUST00000190087 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm21722-201ENSMUST00000190153 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm28423-201ENSMUST00000190701 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm21899-201ENSMUST00000190745 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm21910-201ENSMUST00000191163 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm21849-201ENSMUST00000191571 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm28678-201ENSMUST00000191593 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm20910-201ENSMUST00000193268 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Gm21871-201ENSMUST00000194621 696 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Dupd1-202ENSMUST00000224735 548 ntBASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nup188Q6ZQH8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Gm22189-201ENSMUST00000103822 86 ntBASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Asic1-205ENSMUST00000228185 1818 ntBASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Syt7-205ENSMUST00000224135 1557 ntBASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.1■□□□□ 0.49
Nup188Q6ZQH8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm2451-201ENSMUST00000199447 999 ntBASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm10290-201ENSMUST00000200451 999 ntBASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm27989-201ENSMUST00000184721 107 ntBASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nup188Q6ZQH8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nup188Q6ZQH8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nup188Q6ZQH8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Gm5479-201ENSMUST00000160578 435 ntBASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nup188Q6ZQH8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms