Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm27243-201ENSMUST00000183964 521 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Gm5161-201ENSMUST00000075243 853 ntBASIC12.97□□□□□ -0.33
Rif1Q6PR54 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rif1Q6PR54 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.96□□□□□ -0.33
Rif1Q6PR54 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.96□□□□□ -0.33
Rif1Q6PR54 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.96□□□□□ -0.33
Rif1Q6PR54 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.96□□□□□ -0.33
Rif1Q6PR54 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rif1Q6PR54 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.96□□□□□ -0.34
Rif1Q6PR54 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.95□□□□□ -0.34
Rif1Q6PR54 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.95□□□□□ -0.34
Rif1Q6PR54 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rif1Q6PR54 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm14723-201ENSMUST00000118686 215 ntBASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm37714-201ENSMUST00000194742 342 ntBASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Dupd1-202ENSMUST00000224735 548 ntBASIC12.94□□□□□ -0.34
Rif1Q6PR54 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rif1Q6PR54 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.94□□□□□ -0.34
Rif1Q6PR54 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms