Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd3Q6P9Z1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Gm6345-202ENSMUST00000180900 204 ntBASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcd3Q6P9Z1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcd3Q6P9Z1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcd3Q6P9Z1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smarcd3Q6P9Z1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smarcd3Q6P9Z1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms