Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six1Q62231 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six1Q62231 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six1Q62231 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.82■□□□□ 0.12
Six1Q62231 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six1Q62231 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six1Q62231 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Six1Q62231 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.81■□□□□ 0.12
Six1Q62231 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Six1Q62231 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.81■□□□□ 0.12
Six1Q62231 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.81■□□□□ 0.12
Six1Q62231 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.81■□□□□ 0.12
Six1Q62231 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six1Q62231 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Six1Q62231 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six1Q62231 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Six1Q62231 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Gm27357-201ENSMUST00000183754 135 ntBASIC15.8■□□□□ 0.12
Six1Q62231 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Six1Q62231 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.8■□□□□ 0.12
Six1Q62231 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.8■□□□□ 0.12
Six1Q62231 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Six1Q62231 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.8■□□□□ 0.12
Six1Q62231 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six1Q62231 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Six1Q62231 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Six1Q62231 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.79■□□□□ 0.12
Six1Q62231 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.79■□□□□ 0.12
Six1Q62231 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.79■□□□□ 0.12
Six1Q62231 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Six1Q62231 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Six1Q62231 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Six1Q62231 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.78■□□□□ 0.12
Six1Q62231 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.78■□□□□ 0.12
Six1Q62231 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Six1Q62231 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Six1Q62231 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms