Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scn9aQ62205 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.95■□□□□ 0.46
Scn9aQ62205 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gm24543-201ENSMUST00000103867 82 ntBASIC17.95■□□□□ 0.46
Scn9aQ62205 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.95■□□□□ 0.46
Scn9aQ62205 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gm45384-201ENSMUST00000210451 277 ntBASIC17.95■□□□□ 0.46
Scn9aQ62205 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Gm8515-201ENSMUST00000194852 576 ntBASIC17.94■□□□□ 0.46
Scn9aQ62205 Gm44719-201ENSMUST00000206404 149 ntBASIC17.94■□□□□ 0.46
Scn9aQ62205 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Scn9aQ62205 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Scn9aQ62205 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn9aQ62205 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn9aQ62205 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm14042-201ENSMUST00000120139 833 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Scn9aQ62205 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn9aQ62205 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn9aQ62205 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Scn9aQ62205 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm9719-201ENSMUST00000162765 543 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm42612-201ENSMUST00000197986 623 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm43170-201ENSMUST00000199827 612 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.93■□□□□ 0.46
Scn9aQ62205 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn9aQ62205 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Scn9aQ62205 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scn9aQ62205 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn9aQ62205 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Scn9aQ62205 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Scn9aQ62205 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Scn9aQ62205 Gm23984-201ENSMUST00000157139 203 ntBASIC17.92■□□□□ 0.46
Scn9aQ62205 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.92■□□□□ 0.46
Scn9aQ62205 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Scn9aQ62205 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scn9aQ62205 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn9aQ62205 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.91■□□□□ 0.46
Scn9aQ62205 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.91■□□□□ 0.46
Scn9aQ62205 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn9aQ62205 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.91■□□□□ 0.46
Scn9aQ62205 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms