Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.87□□□□□ -0.51
Notch3Q61982 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Notch3Q61982 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.87□□□□□ -0.51
Notch3Q61982 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Notch3Q61982 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Notch3Q61982 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Notch3Q61982 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Notch3Q61982 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Notch3Q61982 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Notch3Q61982 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Notch3Q61982 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.86□□□□□ -0.51
Notch3Q61982 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.86□□□□□ -0.51
Notch3Q61982 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Mir8117-201ENSMUST00000184773 107 ntBASIC11.86□□□□□ -0.51
Notch3Q61982 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.86□□□□□ -0.51
Notch3Q61982 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.86□□□□□ -0.51
Notch3Q61982 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.86□□□□□ -0.51
Notch3Q61982 Gm36967-201ENSMUST00000193814 266 ntBASIC11.86□□□□□ -0.51
Notch3Q61982 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Notch3Q61982 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Notch3Q61982 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.85□□□□□ -0.51
Notch3Q61982 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Notch3Q61982 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.85□□□□□ -0.51
Notch3Q61982 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.85□□□□□ -0.51
Notch3Q61982 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.85□□□□□ -0.51
Notch3Q61982 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.85□□□□□ -0.51
Notch3Q61982 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.85□□□□□ -0.51
Notch3Q61982 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Notch3Q61982 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Notch3Q61982 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Notch3Q61982 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.85□□□□□ -0.51
Notch3Q61982 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.85□□□□□ -0.51
Notch3Q61982 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Notch3Q61982 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Notch3Q61982 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.84□□□□□ -0.51
Notch3Q61982 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Notch3Q61982 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms