Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col11a1Q61245 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.05■□□□□ 0.32
Col11a1Q61245 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col11a1Q61245 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col11a1Q61245 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.05■□□□□ 0.32
Col11a1Q61245 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col11a1Q61245 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col11a1Q61245 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Col11a1Q61245 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col11a1Q61245 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col11a1Q61245 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.04■□□□□ 0.32
Col11a1Q61245 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.04■□□□□ 0.32
Col11a1Q61245 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col11a1Q61245 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col11a1Q61245 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm2451-201ENSMUST00000199447 999 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm10290-201ENSMUST00000200451 999 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm6266-201ENSMUST00000203844 806 ntBASIC17.03■□□□□ 0.32
Col11a1Q61245 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.03■□□□□ 0.32
Col11a1Q61245 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col11a1Q61245 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.02■□□□□ 0.32
Col11a1Q61245 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Col11a1Q61245 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col11a1Q61245 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.02■□□□□ 0.31
Col11a1Q61245 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.02■□□□□ 0.31
Col11a1Q61245 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col11a1Q61245 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.01■□□□□ 0.31
Col11a1Q61245 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
Col11a1Q61245 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col11a1Q61245 Gm11918-201ENSMUST00000121660 179 ntBASIC17.01■□□□□ 0.31
Col11a1Q61245 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.01■□□□□ 0.31
Col11a1Q61245 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.01■□□□□ 0.31
Col11a1Q61245 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.01■□□□□ 0.31
Col11a1Q61245 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.01■□□□□ 0.31
Col11a1Q61245 Gm16476-201ENSMUST00000221544 139 ntBASIC17.01■□□□□ 0.31
Col11a1Q61245 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col11a1Q61245 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms