Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpbQ60649 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpbQ60649 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ClpbQ60649 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ClpbQ60649 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
ClpbQ60649 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.8□□□□□ -0.04
ClpbQ60649 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.8□□□□□ -0.04
ClpbQ60649 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Gm6257-201ENSMUST00000163864 910 ntBASIC14.8□□□□□ -0.04
ClpbQ60649 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.8□□□□□ -0.04
ClpbQ60649 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ClpbQ60649 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.8□□□□□ -0.04
ClpbQ60649 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpbQ60649 Sybu-209ENSMUST00000228639 4113 ntBASIC14.8□□□□□ -0.04
ClpbQ60649 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ClpbQ60649 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.79□□□□□ -0.04
ClpbQ60649 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.79□□□□□ -0.04
ClpbQ60649 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
ClpbQ60649 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.79□□□□□ -0.04
ClpbQ60649 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.79□□□□□ -0.04
ClpbQ60649 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ClpbQ60649 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.79□□□□□ -0.04
ClpbQ60649 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.79□□□□□ -0.04
ClpbQ60649 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.79□□□□□ -0.04
ClpbQ60649 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ClpbQ60649 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ClpbQ60649 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.79□□□□□ -0.04
ClpbQ60649 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ClpbQ60649 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ClpbQ60649 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ClpbQ60649 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ClpbQ60649 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Gm10060-201ENSMUST00000212002 111 ntBASIC14.78□□□□□ -0.04
ClpbQ60649 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.78□□□□□ -0.04
ClpbQ60649 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.78□□□□□ -0.04
ClpbQ60649 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
ClpbQ60649 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ClpbQ60649 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ClpbQ60649 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
ClpbQ60649 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ClpbQ60649 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ClpbQ60649 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms