Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf1Q5U4C3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Scaf1Q5U4C3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scaf1Q5U4C3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.02■□□□□ 0.79
Scaf1Q5U4C3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Gm18049-201ENSMUST00000208909 581 ntBASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf1Q5U4C3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Gm42466-201ENSMUST00000202099 1301 ntBASIC20■□□□□ 0.79
Scaf1Q5U4C3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf1Q5U4C3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm27622-201ENSMUST00000183779 60 ntBASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.99■□□□□ 0.79
Scaf1Q5U4C3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC19.98■□□□□ 0.79
Scaf1Q5U4C3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Celf4-206ENSMUST00000224553 1729 ntBASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 Gm5779-201ENSMUST00000218467 910 ntBASIC19.97■□□□□ 0.79
Scaf1Q5U4C3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms