Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Gm11779-201ENSMUST00000118541 368 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Gm9682-201ENSMUST00000197505 556 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Gm45167-201ENSMUST00000208007 322 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav2Q5R1I9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav2Q5R1I9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav2Q5R1I9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms