Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Acot6-202ENSMUST00000222921 3622 ntBASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav3-1Q5R1I8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Gm27502-201ENSMUST00000183495 199 ntBASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Trav3-1Q5R1I8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Gm45444-201ENSMUST00000211394 898 ntBASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3-1Q5R1I8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Gm19094-201ENSMUST00000209791 1246 ntBASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Gm40881-201ENSMUST00000223397 166 ntBASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3-1Q5R1I8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms