Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-2Q5R1I4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Mir6990-201ENSMUST00000183724 91 ntBASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Gm7063-201ENSMUST00000186840 981 ntBASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-2Q5R1I4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Gm10154-201ENSMUST00000084445 354 ntBASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-2Q5R1I4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Gm14057-201ENSMUST00000120631 482 ntBASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Gm18889-201ENSMUST00000174284 929 ntBASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Rpph1-201ENSMUST00000175096 319 ntBASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms