Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Gm18666-201ENSMUST00000190039 958 ntBASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7d-4Q5R1H9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7d-4Q5R1H9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7d-4Q5R1H9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Gm27275-201ENSMUST00000184318 272 ntBASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7d-4Q5R1H9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav7d-4Q5R1H9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms