Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Gm9103-201ENSMUST00000119371 405 ntBASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trdv4Q5R1A3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm8097-201ENSMUST00000117903 829 ntBASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm8344-201ENSMUST00000119813 856 ntBASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv4Q5R1A3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv4Q5R1A3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv4Q5R1A3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv4Q5R1A3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv4Q5R1A3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv4Q5R1A3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv4Q5R1A3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms