Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm12957-201ENSMUST00000117835 377 ntBASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm10766-202ENSMUST00000194123 606 ntBASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Gm5356-201ENSMUST00000093326 615 ntBASIC14.69□□□□□ -0.06
Col27a1Q5QNQ9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Gm13392-201ENSMUST00000117708 150 ntBASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Gm8062-201ENSMUST00000139696 444 ntBASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col27a1Q5QNQ9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col27a1Q5QNQ9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm17420-201ENSMUST00000164753 153 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm2451-201ENSMUST00000199447 999 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm10290-201ENSMUST00000200451 999 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm12390-201ENSMUST00000117897 397 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm15806-201ENSMUST00000120696 955 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col27a1Q5QNQ9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col27a1Q5QNQ9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms