Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rnf43Q5NCP0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Gm12008-201ENSMUST00000117791 755 ntBASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Gm43125-201ENSMUST00000201724 730 ntBASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rnf43Q5NCP0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rnf43Q5NCP0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Rnf43Q5NCP0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rnf43Q5NCP0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Mir449b-201ENSMUST00000104833 80 ntBASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf43Q5NCP0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms