Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Chchd1-203ENSMUST00000224633 557 ntBASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rc3h1Q4VGL6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rc3h1Q4VGL6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Gm9385-201ENSMUST00000117563 472 ntBASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rc3h1Q4VGL6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Gm20553-201ENSMUST00000204205 844 ntBASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Thap2-203ENSMUST00000218989 527 ntBASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rc3h1Q4VGL6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms