Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Gm9719-201ENSMUST00000162765 543 ntBASIC18.12■□□□□ 0.49
Col5a2Q3U962 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.12■□□□□ 0.49
Col5a2Q3U962 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.12■□□□□ 0.49
Col5a2Q3U962 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col5a2Q3U962 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.11■□□□□ 0.49
Col5a2Q3U962 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.11■□□□□ 0.49
Col5a2Q3U962 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Gm6745-201ENSMUST00000199216 526 ntBASIC18.11■□□□□ 0.49
Col5a2Q3U962 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.11■□□□□ 0.49
Col5a2Q3U962 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col5a2Q3U962 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.1■□□□□ 0.49
Col5a2Q3U962 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col5a2Q3U962 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm24543-201ENSMUST00000103867 82 ntBASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm5566-201ENSMUST00000116118 459 ntBASIC18.09■□□□□ 0.49
Col5a2Q3U962 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.09■□□□□ 0.49
Col5a2Q3U962 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col5a2Q3U962 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Gm45668-201ENSMUST00000211271 493 ntBASIC18.08■□□□□ 0.49
Col5a2Q3U962 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col5a2Q3U962 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Col5a2Q3U962 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm4875-201ENSMUST00000118257 786 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm23984-201ENSMUST00000157139 203 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms