Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Q3U1D9 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.38□□□□□ -0.27
Q3U1D9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Q3U1D9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Q3U1D9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Q3U1D9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Grk6-207ENSMUST00000225925 2769 ntBASIC13.37□□□□□ -0.27
Q3U1D9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3U1D9 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.37□□□□□ -0.27
Q3U1D9 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.37□□□□□ -0.27
Q3U1D9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3U1D9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Q3U1D9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.37□□□□□ -0.27
Q3U1D9 Gm25911-201ENSMUST00000157621 56 ntBASIC13.37□□□□□ -0.27
Q3U1D9 Gm8318-201ENSMUST00000182954 872 ntBASIC13.37□□□□□ -0.27
Q3U1D9 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.37□□□□□ -0.27
Q3U1D9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3U1D9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.37□□□□□ -0.27
Q3U1D9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Q3U1D9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Q3U1D9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Q3U1D9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.36□□□□□ -0.27
Q3U1D9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.36□□□□□ -0.27
Q3U1D9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Q3U1D9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.36□□□□□ -0.27
Q3U1D9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Q3U1D9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.36□□□□□ -0.27
Q3U1D9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Q3U1D9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Q3U1D9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.35□□□□□ -0.27
Q3U1D9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.35□□□□□ -0.27
Q3U1D9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.35□□□□□ -0.27
Q3U1D9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Q3U1D9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Q3U1D9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.35□□□□□ -0.27
Q3U1D9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Q3U1D9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Gm18246-201ENSMUST00000221023 728 ntBASIC13.35□□□□□ -0.27
Q3U1D9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.35□□□□□ -0.27
Q3U1D9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Q3U1D9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms