Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm7287-201ENSMUST00000205267 602 ntBASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Ush2AQ2QI47 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Ush2AQ2QI47 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm17376-201ENSMUST00000166016 84 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm29310-201ENSMUST00000185468 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21825-201ENSMUST00000185728 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm29109-201ENSMUST00000185895 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21896-201ENSMUST00000186520 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21873-201ENSMUST00000186728 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21794-201ENSMUST00000187056 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21880-201ENSMUST00000187275 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21826-201ENSMUST00000187451 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21198-201ENSMUST00000188393 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21749-201ENSMUST00000189343 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21901-201ENSMUST00000189568 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm29424-201ENSMUST00000189716 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm28599-201ENSMUST00000189838 694 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21867-201ENSMUST00000189917 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm29269-201ENSMUST00000190087 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21722-201ENSMUST00000190153 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm28423-201ENSMUST00000190701 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21899-201ENSMUST00000190745 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21910-201ENSMUST00000191163 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21849-201ENSMUST00000191571 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm28678-201ENSMUST00000191593 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm20910-201ENSMUST00000193268 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm21871-201ENSMUST00000194621 696 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Haglr-201ENSMUST00000100000 2085 ntBASIC8.08□□□□□ -1.12
Ush2AQ2QI47 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm4819-201ENSMUST00000182170 1009 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm43231-201ENSMUST00000202960 2258 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ush2AQ2QI47 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms