Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col19a1Q0VF58 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm22189-201ENSMUST00000103822 86 ntBASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm11425-201ENSMUST00000119608 498 ntBASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm9396-201ENSMUST00000076703 567 ntBASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.34■□□□□ 0.21
Col19a1Q0VF58 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col19a1Q0VF58 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col19a1Q0VF58 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 AY702102-202ENSMUST00000194651 1173 ntBASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Gm15823-201ENSMUST00000064305 670 ntBASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col19a1Q0VF58 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Mir1897-201ENSMUST00000122581 272 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm37917-201ENSMUST00000194711 392 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm43703-201ENSMUST00000200523 763 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms