Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Gm6973-201ENSMUST00000117080 721 ntBASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 AC166341.4-201ENSMUST00000220625 123 ntBASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Znf541Q0GGX2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gm8749-201ENSMUST00000117737 331 ntBASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Gm27397-201ENSMUST00000184997 107 ntBASIC19.43■□□□□ 0.7
Znf541Q0GGX2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.43■□□□□ 0.7
Znf541Q0GGX2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Znf541Q0GGX2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm23935-201ENSMUST00000102303 57 ntBASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm24270-201ENSMUST00000102326 57 ntBASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm24245-201ENSMUST00000157318 57 ntBASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Znf541Q0GGX2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Znf541Q0GGX2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms