Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Mir1897-201ENSMUST00000122581 272 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm45930-201ENSMUST00000221330 292 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm15678-201ENSMUST00000117573 960 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm5354-201ENSMUST00000182417 973 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 Gm37259-201ENSMUST00000193903 849 ntBASIC13.69□□□□□ -0.22
Chd8Q09XV5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm12384-201ENSMUST00000119228 919 ntBASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm10766-202ENSMUST00000194123 606 ntBASIC13.68□□□□□ -0.22
Chd8Q09XV5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.68□□□□□ -0.22
Chd8Q09XV5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Gm14722-201ENSMUST00000118943 689 ntBASIC13.68□□□□□ -0.22
Chd8Q09XV5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd8Q09XV5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm27920-201ENSMUST00000183953 96 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm28911-201ENSMUST00000188837 117 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm22334-201ENSMUST00000158070 133 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm38158-201ENSMUST00000194617 339 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Gm46209-201ENSMUST00000217912 553 ntBASIC13.67□□□□□ -0.22
Chd8Q09XV5 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd8Q09XV5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Snord83b-201ENSMUST00000104546 94 ntBASIC13.66□□□□□ -0.22
Chd8Q09XV5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd8Q09XV5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chd8Q09XV5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms