Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Smn1P97801 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.24□□□□□ -0.29
Smn1P97801 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.24□□□□□ -0.29
Smn1P97801 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Smn1P97801 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.24□□□□□ -0.29
Smn1P97801 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.24□□□□□ -0.29
Smn1P97801 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smn1P97801 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.24□□□□□ -0.29
Smn1P97801 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Smn1P97801 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.23□□□□□ -0.29
Smn1P97801 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Gm11355-201ENSMUST00000121120 306 ntBASIC13.23□□□□□ -0.29
Smn1P97801 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smn1P97801 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.23□□□□□ -0.29
Smn1P97801 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Smn1P97801 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.23□□□□□ -0.29
Smn1P97801 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Gm7367-201ENSMUST00000057611 492 ntBASIC13.23□□□□□ -0.29
Smn1P97801 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smn1P97801 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smn1P97801 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Smn1P97801 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smn1P97801 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.23□□□□□ -0.29
Smn1P97801 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smn1P97801 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smn1P97801 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Smn1P97801 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.22□□□□□ -0.29
Smn1P97801 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smn1P97801 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smn1P97801 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smn1P97801 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smn1P97801 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Smn1P97801 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms