Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nkx3-1P97436 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.3□□□□□ -0.28
Nkx3-1P97436 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Gm7063-201ENSMUST00000186840 981 ntBASIC13.3□□□□□ -0.28
Nkx3-1P97436 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.3□□□□□ -0.28
Nkx3-1P97436 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nkx3-1P97436 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.29□□□□□ -0.28
Nkx3-1P97436 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.29□□□□□ -0.28
Nkx3-1P97436 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gm44872-201ENSMUST00000207864 420 ntBASIC13.29□□□□□ -0.28
Nkx3-1P97436 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.29□□□□□ -0.28
Nkx3-1P97436 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.29□□□□□ -0.28
Nkx3-1P97436 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nkx3-1P97436 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.28□□□□□ -0.28
Nkx3-1P97436 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.28□□□□□ -0.28
Nkx3-1P97436 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.28□□□□□ -0.28
Nkx3-1P97436 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.28□□□□□ -0.28
Nkx3-1P97436 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.28□□□□□ -0.28
Nkx3-1P97436 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nkx3-1P97436 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nkx3-1P97436 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms