Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.3■□□□□ 0.68
Nkx2-3P97334 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-3P97334 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.29■□□□□ 0.68
Nkx2-3P97334 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.29■□□□□ 0.68
Nkx2-3P97334 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-3P97334 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Gm6415-201ENSMUST00000118488 348 ntBASIC19.28■□□□□ 0.68
Nkx2-3P97334 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-3P97334 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-3P97334 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.27■□□□□ 0.68
Nkx2-3P97334 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.27■□□□□ 0.68
Nkx2-3P97334 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-3P97334 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-3P97334 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.26■□□□□ 0.67
Nkx2-3P97334 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.26■□□□□ 0.67
Nkx2-3P97334 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-3P97334 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Gm27306-201ENSMUST00000183970 107 ntBASIC19.25■□□□□ 0.67
Nkx2-3P97334 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-3P97334 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-3P97334 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms