Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CiitaP79621 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.68■□□□□ 0.26
CiitaP79621 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CiitaP79621 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.68■□□□□ 0.26
CiitaP79621 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CiitaP79621 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Gm44492-201ENSMUST00000197012 141 ntBASIC16.68■□□□□ 0.26
CiitaP79621 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.68■□□□□ 0.26
CiitaP79621 Gm45747-201ENSMUST00000212203 999 ntBASIC16.68■□□□□ 0.26
CiitaP79621 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.68■□□□□ 0.26
CiitaP79621 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.68■□□□□ 0.26
CiitaP79621 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CiitaP79621 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CiitaP79621 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CiitaP79621 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CiitaP79621 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CiitaP79621 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.67■□□□□ 0.26
CiitaP79621 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.67■□□□□ 0.26
CiitaP79621 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.67■□□□□ 0.26
CiitaP79621 Gm27702-201ENSMUST00000184512 56 ntBASIC16.67■□□□□ 0.26
CiitaP79621 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.67■□□□□ 0.26
CiitaP79621 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.67■□□□□ 0.26
CiitaP79621 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CiitaP79621 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CiitaP79621 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.67■□□□□ 0.26
CiitaP79621 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CiitaP79621 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CiitaP79621 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Gm24513-201ENSMUST00000174964 138 ntBASIC16.66■□□□□ 0.26
CiitaP79621 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CiitaP79621 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.66■□□□□ 0.26
CiitaP79621 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CiitaP79621 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CiitaP79621 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CiitaP79621 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CiitaP79621 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.65■□□□□ 0.26
CiitaP79621 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 App-207ENSMUST00000227737 2827 ntBASIC16.65■□□□□ 0.26
CiitaP79621 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.65■□□□□ 0.26
CiitaP79621 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.65■□□□□ 0.26
CiitaP79621 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.65■□□□□ 0.26
CiitaP79621 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.65■□□□□ 0.26
CiitaP79621 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.65■□□□□ 0.26
CiitaP79621 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CiitaP79621 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms