Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.49■□□□□ 0.55
Rad50P70388 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rad50P70388 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rad50P70388 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rad50P70388 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.49■□□□□ 0.55
Rad50P70388 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.49■□□□□ 0.55
Rad50P70388 Gm2213-201ENSMUST00000197485 688 ntBASIC18.49■□□□□ 0.55
Rad50P70388 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rad50P70388 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC18.49■□□□□ 0.55
Rad50P70388 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.48■□□□□ 0.55
Rad50P70388 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rad50P70388 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.48■□□□□ 0.55
Rad50P70388 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Grk6-207ENSMUST00000225925 2769 ntBASIC18.48■□□□□ 0.55
Rad50P70388 Gm7222-201ENSMUST00000117512 906 ntBASIC18.48■□□□□ 0.55
Rad50P70388 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rad50P70388 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.48■□□□□ 0.55
Rad50P70388 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rad50P70388 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.47■□□□□ 0.55
Rad50P70388 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rad50P70388 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.47■□□□□ 0.55
Rad50P70388 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.47■□□□□ 0.55
Rad50P70388 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Gm11780-201ENSMUST00000136880 516 ntBASIC18.47■□□□□ 0.55
Rad50P70388 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.47■□□□□ 0.55
Rad50P70388 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.47■□□□□ 0.55
Rad50P70388 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.47■□□□□ 0.55
Rad50P70388 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.47■□□□□ 0.55
Rad50P70388 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rad50P70388 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.46■□□□□ 0.55
Rad50P70388 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.46■□□□□ 0.55
Rad50P70388 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Rad50P70388 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.46■□□□□ 0.55
Rad50P70388 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.46■□□□□ 0.55
Rad50P70388 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.46■□□□□ 0.55
Rad50P70388 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rad50P70388 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rad50P70388 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rad50P70388 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.45■□□□□ 0.54
Rad50P70388 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.45■□□□□ 0.54
Rad50P70388 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.45■□□□□ 0.54
Rad50P70388 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.45■□□□□ 0.54
Rad50P70388 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.45■□□□□ 0.54
Rad50P70388 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.45■□□□□ 0.54
Rad50P70388 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rad50P70388 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Gm15590-201ENSMUST00000078419 552 ntBASIC18.45■□□□□ 0.54
Rad50P70388 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rad50P70388 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rad50P70388 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rad50P70388 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rad50P70388 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rad50P70388 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rad50P70388 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms