Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sec61a1P61620 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.62□□□□□ -0.23
Sec61a1P61620 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a1P61620 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sec61a1P61620 Gm17971-201ENSMUST00000190239 806 ntBASIC13.61□□□□□ -0.23
Sec61a1P61620 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.61□□□□□ -0.23
Sec61a1P61620 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a1P61620 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sec61a1P61620 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sec61a1P61620 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm27741-201ENSMUST00000185060 237 ntBASIC13.6□□□□□ -0.23
Sec61a1P61620 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.6□□□□□ -0.23
Sec61a1P61620 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sec61a1P61620 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sec61a1P61620 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.59□□□□□ -0.23
Sec61a1P61620 BC037039-201ENSMUST00000192003 2205 ntBASIC13.59□□□□□ -0.23
Sec61a1P61620 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sec61a1P61620 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.59□□□□□ -0.23
Sec61a1P61620 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms