Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.56□□□□□ -0.08
Nup43P59235 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Nup43P59235 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.56□□□□□ -0.08
Nup43P59235 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 AV026068-213ENSMUST00000223675 1171 ntBASIC14.56□□□□□ -0.08
Nup43P59235 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.56□□□□□ -0.08
Nup43P59235 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.56□□□□□ -0.08
Nup43P59235 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nup43P59235 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup43P59235 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Sybu-209ENSMUST00000228639 4113 ntBASIC14.55□□□□□ -0.08
Nup43P59235 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.55□□□□□ -0.08
Nup43P59235 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nup43P59235 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Nup43P59235 Gm5682-201ENSMUST00000173402 505 ntBASIC14.55□□□□□ -0.08
Nup43P59235 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nup43P59235 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Nup43P59235 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup43P59235 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Nup43P59235 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Nup43P59235 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nup43P59235 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.54□□□□□ -0.08
Nup43P59235 Gm37153-201ENSMUST00000193637 231 ntBASIC14.54□□□□□ -0.08
Nup43P59235 Gm2651-201ENSMUST00000203560 838 ntBASIC14.54□□□□□ -0.08
Nup43P59235 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.54□□□□□ -0.08
Nup43P59235 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup43P59235 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup43P59235 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup43P59235 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup43P59235 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.54□□□□□ -0.08
Nup43P59235 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup43P59235 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.53□□□□□ -0.08
Nup43P59235 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 Gm18733-201ENSMUST00000173950 856 ntBASIC14.53□□□□□ -0.08
Nup43P59235 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Nup43P59235 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms