Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.78■□□□□ 0.12
Tubgcp3P58854 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Gm21362-201ENSMUST00000194272 928 ntBASIC15.78■□□□□ 0.12
Tubgcp3P58854 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tubgcp3P58854 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Grk6-207ENSMUST00000225925 2769 ntBASIC15.77■□□□□ 0.12
Tubgcp3P58854 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tubgcp3P58854 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.77■□□□□ 0.11
Tubgcp3P58854 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tubgcp3P58854 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.76■□□□□ 0.11
Tubgcp3P58854 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm19164-201ENSMUST00000210667 640 ntBASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm8655-201ENSMUST00000221159 852 ntBASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tubgcp3P58854 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.74■□□□□ 0.11
Tubgcp3P58854 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tubgcp3P58854 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms