Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
NrlP54846 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NrlP54846 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NrlP54846 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NrlP54846 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
NrlP54846 Gm45747-201ENSMUST00000212203 999 ntBASIC16.4■□□□□ 0.22
NrlP54846 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NrlP54846 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.4■□□□□ 0.22
NrlP54846 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.4■□□□□ 0.22
NrlP54846 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.4■□□□□ 0.22
NrlP54846 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NrlP54846 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NrlP54846 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NrlP54846 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NrlP54846 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.39■□□□□ 0.21
NrlP54846 Gm15427-201ENSMUST00000117288 531 ntBASIC16.39■□□□□ 0.21
NrlP54846 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.39■□□□□ 0.21
NrlP54846 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.39■□□□□ 0.21
NrlP54846 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Gm5177-201ENSMUST00000183092 997 ntBASIC16.39■□□□□ 0.21
NrlP54846 Mir6956-201ENSMUST00000183598 62 ntBASIC16.39■□□□□ 0.21
NrlP54846 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.39■□□□□ 0.21
NrlP54846 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.39■□□□□ 0.21
NrlP54846 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.39■□□□□ 0.21
NrlP54846 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.39■□□□□ 0.21
NrlP54846 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NrlP54846 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NrlP54846 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NrlP54846 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NrlP54846 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.38■□□□□ 0.21
NrlP54846 Gm45612-201ENSMUST00000211320 160 ntBASIC16.38■□□□□ 0.21
NrlP54846 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NrlP54846 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.38■□□□□ 0.21
NrlP54846 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NrlP54846 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.38■□□□□ 0.21
NrlP54846 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NrlP54846 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NrlP54846 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NrlP54846 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.37■□□□□ 0.21
NrlP54846 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NrlP54846 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NrlP54846 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NrlP54846 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.37■□□□□ 0.21
NrlP54846 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.37■□□□□ 0.21
NrlP54846 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NrlP54846 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.37■□□□□ 0.21
NrlP54846 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.37■□□□□ 0.21
NrlP54846 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms