Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Msh6P54276 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh6P54276 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Msh6P54276 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.44■□□□□ 0.7
Msh6P54276 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.44■□□□□ 0.7
Msh6P54276 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.44■□□□□ 0.7
Msh6P54276 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Msh6P54276 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.44■□□□□ 0.7
Msh6P54276 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh6P54276 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.44■□□□□ 0.7
Msh6P54276 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh6P54276 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Msh6P54276 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.44■□□□□ 0.7
Msh6P54276 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.44■□□□□ 0.7
Msh6P54276 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Msh6P54276 Gm27430-201ENSMUST00000184585 107 ntBASIC19.44■□□□□ 0.7
Msh6P54276 Gm44333-201ENSMUST00000197168 107 ntBASIC19.44■□□□□ 0.7
Msh6P54276 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.44■□□□□ 0.7
Msh6P54276 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh6P54276 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.43■□□□□ 0.7
Msh6P54276 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.43■□□□□ 0.7
Msh6P54276 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.43■□□□□ 0.7
Msh6P54276 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Msh6P54276 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh6P54276 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.42■□□□□ 0.7
Msh6P54276 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.42■□□□□ 0.7
Msh6P54276 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Msh6P54276 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Gm15693-201ENSMUST00000120470 637 ntBASIC19.42■□□□□ 0.7
Msh6P54276 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.42■□□□□ 0.7
Msh6P54276 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.42■□□□□ 0.7
Msh6P54276 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.42■□□□□ 0.7
Msh6P54276 Gm24158-201ENSMUST00000175263 71 ntBASIC19.42■□□□□ 0.7
Msh6P54276 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.42■□□□□ 0.7
Msh6P54276 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.42■□□□□ 0.7
Msh6P54276 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Msh6P54276 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Msh6P54276 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms