Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.29■□□□□ 0.04
Atxn1P54254 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atxn1P54254 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.29■□□□□ 0.04
Atxn1P54254 Gm13823-201ENSMUST00000119930 345 ntBASIC15.29■□□□□ 0.04
Atxn1P54254 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.29■□□□□ 0.04
Atxn1P54254 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Atxn1P54254 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Atxn1P54254 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atxn1P54254 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Atxn1P54254 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.28■□□□□ 0.04
Atxn1P54254 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.28■□□□□ 0.04
Atxn1P54254 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.28■□□□□ 0.04
Atxn1P54254 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.28■□□□□ 0.04
Atxn1P54254 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.28■□□□□ 0.04
Atxn1P54254 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Atxn1P54254 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Atxn1P54254 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Atxn1P54254 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Atxn1P54254 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Atxn1P54254 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.27■□□□□ 0.04
Atxn1P54254 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.27■□□□□ 0.04
Atxn1P54254 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Gm45747-201ENSMUST00000212203 999 ntBASIC15.27■□□□□ 0.04
Atxn1P54254 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.27■□□□□ 0.04
Atxn1P54254 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Atxn1P54254 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Atxn1P54254 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.27■□□□□ 0.03
Atxn1P54254 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.27■□□□□ 0.03
Atxn1P54254 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Atxn1P54254 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Atxn1P54254 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Atxn1P54254 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Atxn1P54254 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.26■□□□□ 0.03
Atxn1P54254 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Atxn1P54254 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Atxn1P54254 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.26■□□□□ 0.03
Atxn1P54254 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.26■□□□□ 0.03
Atxn1P54254 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Atxn1P54254 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms