Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm7222-201ENSMUST00000117512 906 ntBASIC14.78□□□□□ -0.04
Sox3P53784 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox3P53784 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox3P53784 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox3P53784 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.78□□□□□ -0.04
Sox3P53784 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.78□□□□□ -0.04
Sox3P53784 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox3P53784 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox3P53784 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.78□□□□□ -0.04
Sox3P53784 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox3P53784 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sox3P53784 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox3P53784 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox3P53784 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.77□□□□□ -0.04
Sox3P53784 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Sox3P53784 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sox3P53784 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sox3P53784 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Sox3P53784 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox3P53784 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox3P53784 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.77□□□□□ -0.05
Sox3P53784 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Sox3P53784 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox3P53784 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox3P53784 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox3P53784 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sox3P53784 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Sox3P53784 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Sox3P53784 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 App-207ENSMUST00000227737 2827 ntBASIC14.76□□□□□ -0.05
Sox3P53784 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.76□□□□□ -0.05
Sox3P53784 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Sox3P53784 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox3P53784 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sox3P53784 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox3P53784 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sox3P53784 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Sox3P53784 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.75□□□□□ -0.05
Sox3P53784 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.75□□□□□ -0.05
Sox3P53784 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox3P53784 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms