Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.25■□□□□ 0.03
Pdx1P52946 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pdx1P52946 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pdx1P52946 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pdx1P52946 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pdx1P52946 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdx1P52946 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Gm7222-201ENSMUST00000117512 906 ntBASIC15.24■□□□□ 0.03
Pdx1P52946 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.24■□□□□ 0.03
Pdx1P52946 Mzt1-203ENSMUST00000227948 952 ntBASIC15.24■□□□□ 0.03
Pdx1P52946 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.24■□□□□ 0.03
Pdx1P52946 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pdx1P52946 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pdx1P52946 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pdx1P52946 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.23■□□□□ 0.03
Pdx1P52946 Mir5131-201ENSMUST00000175426 93 ntBASIC15.23■□□□□ 0.03
Pdx1P52946 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.23■□□□□ 0.03
Pdx1P52946 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pdx1P52946 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pdx1P52946 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pdx1P52946 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdx1P52946 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.22■□□□□ 0.03
Pdx1P52946 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Pdx1P52946 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdx1P52946 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.22■□□□□ 0.03
Pdx1P52946 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.22■□□□□ 0.03
Pdx1P52946 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdx1P52946 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pdx1P52946 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pdx1P52946 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pdx1P52946 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Asic1-205ENSMUST00000228185 1818 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms