Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.18■□□□□ 0.34
Nek1P51954 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.18■□□□□ 0.34
Nek1P51954 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nek1P51954 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Nek1P51954 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.18■□□□□ 0.34
Nek1P51954 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nek1P51954 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nek1P51954 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nek1P51954 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nek1P51954 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.17■□□□□ 0.34
Nek1P51954 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.17■□□□□ 0.34
Nek1P51954 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nek1P51954 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.17■□□□□ 0.34
Nek1P51954 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.17■□□□□ 0.34
Nek1P51954 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.17■□□□□ 0.34
Nek1P51954 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.17■□□□□ 0.34
Nek1P51954 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nek1P51954 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.16■□□□□ 0.34
Nek1P51954 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Nek1P51954 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Gm19891-201ENSMUST00000189771 303 ntBASIC17.16■□□□□ 0.34
Nek1P51954 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.16■□□□□ 0.34
Nek1P51954 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nek1P51954 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nek1P51954 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Nek1P51954 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nek1P51954 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Nek1P51954 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.15■□□□□ 0.34
Nek1P51954 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.15■□□□□ 0.34
Nek1P51954 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm8825-201ENSMUST00000182565 998 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm4518-201ENSMUST00000182638 718 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms