Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Msh2P43247 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh2P43247 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh2P43247 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh2P43247 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.92■□□□□ 0.14
Msh2P43247 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh2P43247 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Msh2P43247 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh2P43247 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh2P43247 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh2P43247 Sybu-209ENSMUST00000228639 4113 ntBASIC15.92■□□□□ 0.14
Msh2P43247 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Gm13312-201ENSMUST00000119631 718 ntBASIC15.91■□□□□ 0.14
Msh2P43247 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Msh2P43247 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.91■□□□□ 0.14
Msh2P43247 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msh2P43247 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh2P43247 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.9■□□□□ 0.14
Msh2P43247 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.9■□□□□ 0.14
Msh2P43247 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.9■□□□□ 0.14
Msh2P43247 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.9■□□□□ 0.14
Msh2P43247 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Msh2P43247 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh2P43247 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Msh2P43247 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh2P43247 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.89■□□□□ 0.13
Msh2P43247 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh2P43247 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Gm9103-201ENSMUST00000119371 405 ntBASIC15.89■□□□□ 0.13
Msh2P43247 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Msh2P43247 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Gm18669-201ENSMUST00000216049 778 ntBASIC15.89■□□□□ 0.13
Msh2P43247 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.89■□□□□ 0.13
Msh2P43247 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.89■□□□□ 0.13
Msh2P43247 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh2P43247 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms